Microstructure
& Connectivity Lab

Publication collection

Functional Connectivity

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2023
Magnetic Resonance ImagingArticle

Distortion correction of functional MRI without reverse phase encoding scans or field maps

Tian Yu et al. · Last author: Kurt G. Schilling

SynBOLD-DisCo corrects susceptibility distortion in functional MRI using the acquired functional data and a structural image. Synthesized undistorted BOLD contrast provides a correction target when reverse phase-encoding scans or field maps are unavailable.

Image ProcessingFunctional Connectivity
SynBOLD-DisCo synthesizes an undistorted BOLD reference to correct functional MRI geometry.
2023
Medical Imaging 2023: Image ProcessingConference paper

SynBOLD-DisCo: synthetic BOLD images for distortion correction of fMRI without additional calibration scans

Tian Yu, Leon Y. Cai, Victoria L. Morgan, Sarah E. Goodale, Dario J. Englot, Catherine E. Chang, Bennett A. Landman, Kurt G. Schilling

This conference paper introduces SynBOLD-DisCo, using a 3D U-Net to synthesize undistorted BOLD images for fMRI susceptibility correction. It is the proceedings contribution preceding the expanded 2023 journal study.

Image ProcessingFunctional Connectivity
Example functional MRI geometry before and after SynBOLD-DisCo correction, compared with a structural reference.
2023
Proceedings of the National Academy of SciencesArticle

Whole-brain, gray, and white matter time-locked functional signal changes with simple tasks and model-free analysis

Kurt G. Schilling et al. · Last author: John C. Gore

Simple tasks and model-free analysis reveal widespread time-locked BOLD changes in both gray and white matter. The shape of the response varies across regions and stimuli, indicating that conventional analyses can miss distributed signals when they impose a narrow response model or discard white matter.

Functional Connectivity
Task-locked BOLD signal changes mapped across gray matter regions and white matter pathways.
2022
Cerebral Cortex CommunicationsArticle

Anomalous and heterogeneous characteristics of the BOLD hemodynamic response function in white matter

Kurt G Schilling, Muwei Li, Francois Rheault, Zhaohua Ding, Adam W Anderson, Hakmook Kang, Bennett A Landman, John C Gore

White matter has a different BOLD hemodynamic response from gray matter, and the response varies within and between pathways. These differences also relate to diffusion MRI measures of tissue microstructure.

Functional ConnectivityMicrostructure
Hemodynamic response functions vary across and along white matter pathways.
2019
Magnetic Resonance in MedicineArticle

Functional tractography of white matter by high angular resolution functional-correlation imaging (HARFI)

Kurt G. Schilling et al. · Last author: John C. Gore

HARFI estimates the directional structure of correlations in white matter BOLD signals without restricting them to a tensor. Its sampling approach reduces orientation bias and represents bending or fanning patterns, providing a functional MRI complement to diffusion-based descriptions of white matter pathways.

Functional ConnectivityTractography
HARFI functional pathways compared with familiar structural white matter pathways.